RID=1032425806-013487-3242,

BLASTX 2.2.4 [Aug-26-2002]

    Reference:
    Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
    Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
    "Gapped BLAST and PSI-BLAST: a new generation of protein database search
    programs",  Nucleic Acids Res. 25:3389-3402.

    RID: 1032425806-013487-3242

    Query=
             (577 letters)

    Database: All non-redundant GenBank CDS
    translations+PDB+SwissProt+PIR+PRF
               1,171,253 sequences; 370,891,306 total letters

     If you have any problems or questions with the results of this search
    please refer to the BLAST FAQs

    Taxonomy reports

                                                                     Score    E
    Sequences producing significant alignments:                      (bits) Value

    gb|AAN04997.1|  (AC105744) putative transcription initiation...   292   2e-78
    ref|NP_192998.1|  (NM_117331) putative protein; protein id: ...   179   2e-44
    gb|AAF30307.1|AC018907_7  (AC018907) putative RING zinc fing...    38   0.067
    ref|NP_566274.1|  (NM_111489) putative RING zinc finger prot...    38   0.067
    gb|AAM78102.1|  (AY125510) AT5g19080/T16G12_120 [Arabidopsis...    38   0.067
    ref|NP_566356.1|  (NM_111812) expressed protein; protein id:...    38   0.087
    ref|NP_197409.1|  (NM_121913) unknown protein; protein id: A...    37   0.11
    ref|NP_510817.1|  (NM_078416) F10D7.5b.p [Caenorhabditis ele...    37   0.19
    gb|AAL86506.1|AC099040_10  (AC099040) putative hydroxyprolin...    37   0.19
    gb|AAM81093.1|U40945_8  (U40945) Hypothetical protein F10D7....    37   0.19
    ref|NP_510818.1|  (NM_078417) D. melanogaster finger protein...    37   0.19
    gb|AAM81090.1|U40945_5  (U40945) Hypothetical protein F10D7....    37   0.19
    pir||T16028  hypothetical protein F10D7.5 - Caenorhabditis e...    37   0.19
    ref|NP_195765.1|  (NM_120223) putative protein; protein id: ...    36   0.25
    gb|AAF48305.1|  (AE003493) CG9941-PA [Drosophila melanogaster]     35   0.43
    gb|AAM67190.1|  (AY088884) putative RING zinc finger protein...    35   0.43
    ref|NP_195940.1|  (NM_120398) expressed protein; protein id:...    35   0.43
    ref|NP_519196.1|  (NC_003295) PROBABLE TWO-COMPONENT SYSTEM ...    35   0.74
    gb|EAA04818.1|  (AAAB01008810) agCP6745 [Anopheles gambiae s...    35   0.74
    gb|ZP_00043559.1|  (NZ_AAAN01000154) hypothetical protein [M...    35   0.74
    ref|NP_199282.1|  (NM_123836) putative protein; protein id: ...    35   0.74
    ref|NP_190909.1|  (NM_115201) putative protein; protein id: ...    34   0.96
    dbj|BAA25470.1|  (AB011116) KIAA0544 protein [Homo sapiens]        34   1.3
    ref|NP_510385.1|  (NM_077984) Zinc finger, C3HC4 type (RING ...    34   1.3
    ref|NP_649187.1|  (NM_140930) CG7298 gene product [Drosophil...    33   1.6
    gb|AAF49059.2|  (AE003514) CG7298-PA [Drosophila melanogaster]     33   1.6
    ref|XP_148077.1|  (XM_148077) RIKEN cDNA 2610042J20 [Mus mus...    33   1.6
    gb|ZP_00046129.1|  (NZ_AAAB01000003) hypothetical protein [L...    33   1.6
    dbj|BAB27816.1|  (AK011747) Zinc finger, C3HC4 type (RING fi...    33   1.6
    ref|NP_566724.1|  (NM_113229) auxin-regulated protein; prote...    33   2.1
    gb|AAM65682.1|  (AY088137) unknown [Arabidopsis thaliana]          33   2.1
    dbj|BAA95741.1|  (AB025608) contains similarity to ankyrin l...    33   2.1
    ref|NP_199323.1|  (NM_123878) putative protein; protein id: ...    33   2.1
    ref|NP_683586.1|  (NM_148744) auxin-regulated protein; prote...    33   2.1
    ref|NP_567428.1|  (NM_117514) Expressed protein; protein id:...    33   2.8
    emb|CAC59873.1|  (AL160371) probable heat shock protein hslu...    33   2.8
    dbj|BAB61152.1|  (AP003199) contains ESTs AU068079(C11823),A...    33   2.8
    ref|NP_181354.1|  (NM_129376) unknown protein; protein id: A...    32   3.7
    dbj|BAC10202.1|  (AP004395) contains ESTs AU055804(S20063),A...    32   4.8
    ref|NP_610973.1|  (NM_137129) CG12863 gene product [Drosophi...    32   4.8
    gb|AAF58228.2|  (AE003814) CG12863-PA [Drosophila melanogaster]    32   4.8
    gb|AAK84420.1|AF400063_1  (AF400063) neuralized 1 [Mus muscu...    32   6.2
    ref|NP_067335.1|  (NM_021360) neuralized homolog (Drosophila...    32   6.2
    ref|NP_181076.1|  (NM_129085) unknown protein; protein id: A...    32   6.2
    ref|NP_487802.1|  (NC_003272) oligopeptide binding protein o...    32   6.2
    ref|NP_203261.1|  (NC_003083) IAP-4 [Epiphyas postvittana nu...    32   6.2
    gb|AAM97032.1|  (AY136366) unknown protein [Arabidopsis thal...    32   6.2
    ref|XP_123433.1|  (XM_123433) similar to neuralized homolog ...    32   6.2
    gb|AAK97495.1|AF401228_1  (AF401228) neuralized [Mus musculus]     32   6.2
    ref|XP_085974.1|  (XM_085974) similar to zinc finger protein...    32   6.2
    pir||S68824  rngB protein, cytosolic - slime mold (Dictyoste...    32   6.2
    emb|CAB64571.1|  (AL135898) hypothetical protein L673.04 [Le...    32   6.2
    ref|NP_127506.1|  (NC_002532) replicase ORF1ab polyprotein [...    31   8.2
    ref|NP_174371.1|  (NM_102823) hypothetical protein; protein ...    31   8.2
    sp|P19811|RPOA_EAV  POL polyprotein (ORF1A/1B) [Contains: RN...    31   8.2
    ref|XP_094260.3|  (XM_094260) similar to neuralized [Homo sa...    31   8.2
    gb|AAM67026.1|  (AY088707) unknown [Arabidopsis thaliana]          31   8.2
    gb|AAL69890.1|AF419159_1  (AF419159) neuralized [Xenopus lae...    31   8.2
    ref|NP_566438.1|  (NM_112128) expressed protein; protein id:...    31   8.2
    ref|XP_116162.1|  (XM_116162) similar to evidence:NAS~hypoth...    31   8.2
    gb|AAC32390.3|  (AF082873) histidine kinase [Herbaspirillum ...    31   8.2

    Alignments

    >gb|AAN04997.1| (AC105744) putative transcription initiation factor [Oryza sativa
               (japonica cultivar-group)]
              Length = 532

     Score =  292 bits (747), Expect = 2e-78
     Identities = 140/141 (99%), Positives = 140/141 (99%)
     Frame = +3

    Query: 153 MGSADLVLKAACEGCGSPSDLYGTSCKHTTLCSSCGKSMALSSARCLVCSAPITNLIREY 332
               MGSADLVLKAACEGCGSPSDLYGTSCKHTTLCSSCGKSMALS ARCLVCSAPITNLIREY
    Sbjct: 1   MGSADLVLKAACEGCGSPSDLYGTSCKHTTLCSSCGKSMALSGARCLVCSAPITNLIREY 60

    Query: 333 NVRANATTDKSFSIGRFVTGLPPFSKKKSAENKWSLHKEGLQGRQIPENMREKYNRKPWI 512
               NVRANATTDKSFSIGRFVTGLPPFSKKKSAENKWSLHKEGLQGRQIPENMREKYNRKPWI
    Sbjct: 61  NVRANATTDKSFSIGRFVTGLPPFSKKKSAENKWSLHKEGLQGRQIPENMREKYNRKPWI 120

    Query: 513 LEDETGQYQYQGQMEGSQSST 575
               LEDETGQYQYQGQMEGSQSST
    Sbjct: 121 LEDETGQYQYQGQMEGSQSST 141

    >ref|NP_192998.1| (NM_117331) putative protein; protein id: At4g12610.1 [Arabidopsis
               thaliana]
     emb|CAB53754.1| (AL049730) putative protein [Arabidopsis thaliana]
     emb|CAB78304.1| (AL161534) putative protein [Arabidopsis thaliana]
              Length = 649

     Score =  179 bits (454), Expect = 2e-44
     Identities = 85/136 (62%), Positives = 102/136 (74%)
     Frame = +3

    Query: 168 LVLKAACEGCGSPSDLYGTSCKHTTLCSSCGKSMALSSARCLVCSAPITNLIREYNVRAN 347
               L L  +C GCGS SDLYG+SC+H TLC  CG++MA + ++C  C   +T LIREYNVRA
    Sbjct: 5   LQLNTSCVGCGSQSDLYGSSCRHMTLCLKCGRTMAQNKSKCHECGTVVTRLIREYNVRAA 64

    Query: 348 ATTDKSFSIGRFVTGLPPFSKKKSAENKWSLHKEGLQGRQIPENMREKYNRKPWILEDET 527
               A TDK++ IGRFVTGLP F  KK +ENKWSL K+  QGRQ  +  REK   KPWILEDET
    Sbjct: 65  APTDKNYFIGRFVTGLPNF--KKGSENKWSLRKDIPQGRQFTDAQREKLKNKPWILEDET 122

    Query: 528 GQYQYQGQMEGSQSST 575
               GQ+QYQG +EGSQS+T
    Sbjct: 123 GQFQYQGHLEGSQSAT 138

    >gb|AAF30307.1|AC018907_7 (AC018907) putative RING zinc finger protein [Arabidopsis thaliana]
              Length = 546

     Score = 38.1 bits (87), Expect = 0.067
     Identities = 13/32 (40%), Positives = 19/32 (58%)
     Frame = +3

    Query: 228 CKHTTLCSSCGKSMALSSARCLVCSAPITNLI 323
               C+H  +CS C K + L S +C +C  PI  L+
    Sbjct: 504 CRHLCMCSDCAKELRLQSNKCPICRQPIEELL 535

    >ref|NP_566274.1| (NM_111489) putative RING zinc finger protein; protein id:
               At3g06140.1, supported by cDNA: 40787. [Arabidopsis
               thaliana]
     gb|AAM65605.1| (AY088059) putative RING zinc finger protein [Arabidopsis thaliana]
              Length = 359

     Score = 38.1 bits (87), Expect = 0.067
     Identities = 13/32 (40%), Positives = 19/32 (58%)
     Frame = +3

    Query: 228 CKHTTLCSSCGKSMALSSARCLVCSAPITNLI 323
               C+H  +CS C K + L S +C +C  PI  L+
    Sbjct: 317 CRHLCMCSDCAKELRLQSNKCPICRQPIEELL 348

    >gb|AAM78102.1| (AY125510) AT5g19080/T16G12_120 [Arabidopsis thaliana]
              Length = 378

     Score = 38.1 bits (87), Expect = 0.067
     Identities = 13/41 (31%), Positives = 22/41 (52%)
     Frame = +3

    Query: 204 PSDLYGTSCKHTTLCSSCGKSMALSSARCLVCSAPITNLIR 326
               P D     C+H +LCS C + +   + +C +C  PI  L++
    Sbjct: 328 PKDTAVMPCRHLSLCSDCAEELRFQTNKCPICRQPIHELVK 368

    >ref|NP_566356.1| (NM_111812) expressed protein; protein id: At3g09770.1, supported
               by cDNA: 38757., supported by cDNA: gi_18377643
               [Arabidopsis thaliana]
     gb|AAF23258.1|AC015985_16 (AC015985) putative RING zinc finger protein [Arabidopsis thaliana]
     gb|AAF23312.1|AC016661_37 (AC016661) unknown protein [Arabidopsis thaliana]
     gb|AAL66972.1| (AY074275) putative RING zinc finger protein [Arabidopsis thaliana]
     gb|AAM65384.1| (AY087831) putative RING zinc finger protein [Arabidopsis thaliana]
              Length = 388

     Score = 37.7 bits (86), Expect = 0.087
     Identities = 16/48 (33%), Positives = 23/48 (47%)
     Frame = +3

    Query: 204 PSDLYGTSCKHTTLCSSCGKSMALSSARCLVCSAPITNLIREYNVRAN 347
               P D     C+H  +CS C K +   + RC +C  P+  L+ E  V  N
    Sbjct: 326 PRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLL-EIKVHGN 372

    >ref|NP_197409.1| (NM_121913) unknown protein; protein id: At5g19080.1 [Arabidopsis
               thaliana]
              Length = 378

     Score = 37.4 bits (85), Expect = 0.11
     Identities = 13/41 (31%), Positives = 21/41 (50%)
     Frame = +3

    Query: 204 PSDLYGTSCKHTTLCSSCGKSMALSSARCLVCSAPITNLIR 326
               P D     C+H  LCS C + +   + +C +C  PI  L++
    Sbjct: 328 PKDTAVMPCRHLCLCSDCAEELRFQTNKCPICRQPIHELVK 368

    >ref|NP_510817.1| (NM_078416) F10D7.5b.p [Caenorhabditis elegans]
              Length = 750

     Score = 36.6 bits (83), Expect = 0.19
     Identities = 11/36 (30%), Positives = 21/36 (57%)
     Frame = +3

    Query: 225 SCKHTTLCSSCGKSMALSSARCLVCSAPITNLIREY 332
               +C H  +C  CG+ +  +   C +C AP+ ++I+ Y
    Sbjct: 713 TCGHMCMCFECGRRLLTTKGTCPICRAPVQDVIKTY 748

    >gb|AAL86506.1|AC099040_10 (AC099040) putative hydroxyproline-rich glycoprotein [Oryza sativa
               (japonica cultivar-group)]
     gb|AAM18751.1|AC099325_7 (AC099325) unknown protein [Oryza sativa (japonica cultivar-group)]
              Length = 425

     Score = 36.6 bits (83), Expect = 0.19
     Identities = 13/40 (32%), Positives = 20/40 (49%)
     Frame = +3

    Query: 204 PSDLYGTSCKHTTLCSSCGKSMALSSARCLVCSAPITNLI 323
               P D     C+H  +CS C K +   + RC +C  P+  L+
    Sbjct: 350 PRDTTVLPCRHMCMCSECAKVLRYQTNRCPICRQPVERLL 389

    >gb|AAM81093.1|U40945_8 (U40945) Hypothetical protein F10D7.5d [Caenorhabditis elegans]
              Length = 465

     Score = 36.6 bits (83), Expect = 0.19
     Identities = 11/36 (30%), Positives = 21/36 (57%)
     Frame = +3

    Query: 225 SCKHTTLCSSCGKSMALSSARCLVCSAPITNLIREY 332
               +C H  +C  CG+ +  +   C +C AP+ ++I+ Y
    Sbjct: 428 TCGHMCMCFECGRRLLTTKGTCPICRAPVQDVIKTY 463

    >ref|NP_510818.1| (NM_078417) D. melanogaster finger protein neuralized
               [Caenorhabditis elegans]
              Length = 795

     Score = 36.6 bits (83), Expect = 0.19
     Identities = 11/36 (30%), Positives = 21/36 (57%)
     Frame = +3

    Query: 225 SCKHTTLCSSCGKSMALSSARCLVCSAPITNLIREY 332
               +C H  +C  CG+ +  +   C +C AP+ ++I+ Y
    Sbjct: 758 TCGHMCMCFECGRRLLTTKGTCPICRAPVQDVIKTY 793

    >gb|AAM81090.1|U40945_5 (U40945) Hypothetical protein F10D7.5a [Caenorhabditis elegans]
              Length = 634

     Score = 36.6 bits (83), Expect = 0.19
     Identities = 11/36 (30%), Positives = 21/36 (57%)
     Frame = +3

    Query: 225 SCKHTTLCSSCGKSMALSSARCLVCSAPITNLIREY 332
               +C H  +C  CG+ +  +   C +C AP+ ++I+ Y
    Sbjct: 597 TCGHMCMCFECGRRLLTTKGTCPICRAPVQDVIKTY 632

    >pir||T16028 hypothetical protein F10D7.5 - Caenorhabditis elegans
              Length = 824

     Score = 36.6 bits (83), Expect = 0.19
     Identities = 11/36 (30%), Positives = 21/36 (57%)
     Frame = +3

    Query: 225 SCKHTTLCSSCGKSMALSSARCLVCSAPITNLIREY 332
               +C H  +C  CG+ +  +   C +C AP+ ++I+ Y
    Sbjct: 787 TCGHMCMCFECGRRLLTTKGTCPICRAPVQDVIKTY 822

    >ref|NP_195765.1| (NM_120223) putative protein; protein id: At5g01450.1 [Arabidopsis
               thaliana]
     pir||T48167 hypothetical protein T10O8.160 - Arabidopsis thaliana
     emb|CAB81928.1| (AL161746) putative protein [Arabidopsis thaliana]
              Length = 428

     Score = 36.2 bits (82), Expect = 0.25
     Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
     Frame = +3

    Query: 150 AMGSADLVLKAACEGC-GSPSDLYGTSCKHTTLCSSCGKSMALSSARCLVCSAPITNLIR 326
               A G      +  C  C  +P D +  SC H   C  CG  +A +S  C VC   I  + +
    Sbjct: 365 AHGEGHSSTRYLCAICYDAPRDCFFLSCGHCVACFQCGTRIAETSGFCPVCRKKIRKVKK 424

    Query: 327 EYNV 338
                +NV
    Sbjct: 425 IFNV 428

    >gb|AAF48305.1| (AE003493) CG9941-PA [Drosophila melanogaster]
              Length = 789

     Score = 35.4 bits (80), Expect = 0.43
     Identities = 14/43 (32%), Positives = 23/43 (52%)
     Frame = +3

    Query: 228 CKHTTLCSSCGKSMALSSARCLVCSAPITNLIREYNVRANATT 356
               C+H  LC+SC  S+   +  C +C AP   L++   V+   +T
    Sbjct: 334 CRHLCLCNSCADSLRYQANNCPICRAPFRALLQIRAVQKGIST 376

    >gb|AAM67190.1| (AY088884) putative RING zinc finger protein [Arabidopsis thaliana]
              Length = 337

     Score = 35.4 bits (80), Expect = 0.43
     Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
     Frame = +3

    Query: 186 CEGCGS-PSDLYGTSCKHTTLCSSCGKSMALSSARCLVCSAPITNLI 323
               C  C S P D     C+H  +CS C K++   +  C VC  P+  L+
    Sbjct: 285 CVVCLSEPRDTTVLPCRHMCMCSGCAKALRFQTNLCPVCRQPVEMLL 331

    >ref|NP_195940.1| (NM_120398) expressed protein; protein id: At5g03200.1, supported
               by cDNA: 98672. [Arabidopsis thaliana]
     pir||T48341 hypothetical protein F15A17.230 - Arabidopsis thaliana
     emb|CAB86087.1| (AL163002) putative protein [Arabidopsis thaliana]
     dbj|BAB08380.1| (AB005240) RING zinc finger protein-like [Arabidopsis thaliana]
              Length = 337

     Score = 35.4 bits (80), Expect = 0.43
     Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
     Frame = +3

    Query: 186 CEGCGS-PSDLYGTSCKHTTLCSSCGKSMALSSARCLVCSAPITNLI 323
               C  C S P D     C+H  +CS C K++   +  C VC  P+  L+
    Sbjct: 285 CVVCLSEPRDTTVLPCRHMCMCSGCAKALRFQTNLCPVCRQPVEMLL 331

    >ref|NP_519196.1| (NC_003295) PROBABLE TWO-COMPONENT SYSTEM SENSOR HISTIDINE KINASE
               TRANSCRIPTION REGULATOR PROTEIN [Ralstonia solanacearum]
     emb|CAD14777.1| (AL646062) PROBABLE TWO-COMPONENT SYSTEM SENSOR HISTIDINE KINASE
               TRANSCRIPTION REGULATOR PROTEIN [Ralstonia solanacearum]
              Length = 784

     Score = 34.7 bits (78), Expect = 0.74
     Identities = 21/43 (48%), Positives = 25/43 (57%)
     Frame = +2

    Query: 167 PGAEGGVRGLRLAVGPLRHVMQAHHALQLLRQIHGALQRPLPR 295
               P  +  VRGL LA GP  H++  H ALQL RQ   AL   +PR
    Sbjct: 173 PDPDSVVRGLYLAEGPRGHLLD-HLALQLARQAGPALAGDVPR 214

    >gb|EAA04818.1| (AAAB01008810) agCP6745 [Anopheles gambiae str. PEST]
              Length = 307

     Score = 34.7 bits (78), Expect = 0.74
     Identities = 12/33 (36%), Positives = 19/33 (57%)
     Frame = +3

    Query: 228 CKHTTLCSSCGKSMALSSARCLVCSAPITNLIR 326
               C+H  LC+SC  S+   +  C +C AP   L++
    Sbjct: 246 CRHLCLCNSCADSLRYQANNCPICRAPFRALLQ 278

    >gb|ZP_00043559.1| (NZ_AAAN01000154) hypothetical protein [Magnetococcus sp. MC-1]
              Length = 487

     Score = 34.7 bits (78), Expect = 0.74
     Identities = 21/62 (33%), Positives = 30/62 (47%), Gaps = 1/62 (1%)
     Frame = +3

    Query: 150 AMGSADLVLKAACEGCGSPSDLYGTSCKHTTLCSSCGKSMALSSARCLVC-SAPITNLIR 326
               AM   D  ++  C  CG+  D YG SC+   +CS+  +   L  A+C VC S P+
    Sbjct: 130 AMFLPDRFIRGTCPHCGAV-DQYGDSCE---VCSATYRPTELKEAKCAVCGSQPVEKSSE 185

    Query: 327 EY 332
                Y
    Sbjct: 186 HY 187

    >ref|NP_199282.1| (NM_123836) putative protein; protein id: At5g44690.1 [Arabidopsis
               thaliana]
     dbj|BAB08822.1| (AB016874) gene_id:K23L20.2~pir||T00474~similar to unknown protein
               [Arabidopsis thaliana]
              Length = 684

     Score = 34.7 bits (78), Expect = 0.74
     Identities = 16/54 (29%), Positives = 25/54 (45%), Gaps = 1/54 (1%)
     Frame = +3

    Query: 174 LKAACEGCGS-PSDLYGTSCKHTTLCSSCGKSMALSSARCLVCSAPITNLIREY 332
               L+  C  C   P D     C H   C  C   +  S+ +C +C API +++R +
    Sbjct: 628 LERNCSICFEMPIDSLLYRCGHMCTCLKCAHELQWSNMKCPICMAPIVDVVRAF 681

    >ref|NP_190909.1| (NM_115201) putative protein; protein id: At3g53410.1, supported by
               cDNA: 110247. [Arabidopsis thaliana]
     pir||T45881 hypothetical protein F4P12.110 - Arabidopsis thaliana
     emb|CAB67648.1| (AL132966) putative protein [Arabidopsis thaliana]
     gb|AAM61084.1| (AY084516) putative RING zinc finger protein [Arabidopsis thaliana]
              Length = 299

     Score = 34.3 bits (77), Expect = 0.96
     Identities = 12/40 (30%), Positives = 19/40 (47%)
     Frame = +3

    Query: 204 PSDLYGTSCKHTTLCSSCGKSMALSSARCLVCSAPITNLI 323
               P D     C+H  +CS C K +   +  C +C  P+  L+
    Sbjct: 250 PRDTTVLPCRHMCMCSGCAKLLRFQTNLCPICRQPVDRLL 289

    >dbj|BAA25470.1| (AB011116) KIAA0544 protein [Homo sapiens]
              Length = 583

     Score = 33.9 bits (76), Expect = 1.3
     Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
     Frame = +3

    Query: 207 SDLYGT---SCKHTTLCSSCGKSMALSSARCLVCSAPITNL--IREYNVRANATTDKSFS 371
               SDL  T    C+H  LC+SC  ++   +  C +C  P   L  IR    +  A +  SFS
    Sbjct: 314 SDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFS 373

    >ref|NP_510385.1| (NM_077984) Zinc finger, C3HC4 type (RING finger) [Caenorhabditis
               elegans]
     pir||T19204 hypothetical protein C11H1.3 - Caenorhabditis elegans
     emb|CAA94116.1| (Z70205) predicted using Genefinder~contains similarity to Pfam
               domain: PF00097 (Zinc finger, C3HC4 type (RING finger)),
               Score=29.8, E-value=2.2e-08, N=1~cDNA EST yk67c6.5 comes
               from this gene~cDNA EST yk597f9.5 comes from this
               gene~cDNA EST yk653f11.5>
              Length = 529

     Score = 33.9 bits (76), Expect = 1.3
     Identities = 12/33 (36%), Positives = 18/33 (54%)
     Frame = +3

    Query: 228 CKHTTLCSSCGKSMALSSARCLVCSAPITNLIR 326
               C+H  +CS+C  S+      C +C +P   LIR
    Sbjct: 284 CRHLCVCSNCADSLRYKHNNCPICRSPFRALIR 316

    >ref|NP_649187.1| (NM_140930) CG7298 gene product [Drosophila melanogaster]
     gb|AAL28884.1| (AY061336) LD26327p [Drosophila melanogaster]
              Length = 369

     Score = 33.5 bits (75), Expect = 1.6
     Identities = 26/87 (29%), Positives = 37/87 (41%), Gaps = 2/87 (2%)
     Frame = +3

    Query: 144 SPAMGSADLVLKAACEGCGSPSDLYGT--SCKHTTLCSSCGKSMALSSARCLVCSAPITN 317
               S   G+ + VL++ C+    P   +G   SC     C S    + L S +C        N
    Sbjct: 144 SNTQGTNETVLESLCDVV-PPGQYFGDTESCSTWHYCESTSTGLVLQSGKCSA------N 196

    Query: 318 LIREYNVRANATTDKSFSIGRFVTGLP 398
                   YNV AN  T +S S+   VT +P
    Sbjct: 197 NQTAYNVLANQCTYESASVCSRVTNIP 223

    >gb|AAF49059.2| (AE003514) CG7298-PA [Drosophila melanogaster]
              Length = 356

     Score = 33.5 bits (75), Expect = 1.6
     Identities = 26/87 (29%), Positives = 37/87 (41%), Gaps = 2/87 (2%)
     Frame = +3

    Query: 144 SPAMGSADLVLKAACEGCGSPSDLYGT--SCKHTTLCSSCGKSMALSSARCLVCSAPITN 317
               S   G+ + VL++ C+    P   +G   SC     C S    + L S +C        N
    Sbjct: 131 SNTQGTNETVLESLCDVV-PPGQYFGDTESCSTWHYCESTSTGLVLQSGKCSA------N 183

    Query: 318 LIREYNVRANATTDKSFSIGRFVTGLP 398
                   YNV AN  T +S S+   VT +P
    Sbjct: 184 NQTAYNVLANQCTYESASVCSRVTNIP 210

    >ref|XP_148077.1| (XM_148077) RIKEN cDNA 2610042J20 [Mus musculus]
              Length = 578

     Score = 33.5 bits (75), Expect = 1.6
     Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
     Frame = +3

    Query: 207 SDLYGT---SCKHTTLCSSCGKSMALSSARCLVCSAPITNL--IREYNVRANATTDKSFS 371
               SDL  T    C+H  LC+SC  ++   +  C +C  P   L  IR    +  A +  SFS
    Sbjct: 283 SDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPISFS 342

    >gb|ZP_00046129.1| (NZ_AAAB01000003) hypothetical protein [Lactobacillus gasseri]
              Length = 281

     Score = 33.5 bits (75), Expect = 1.6
     Identities = 24/95 (25%), Positives = 40/95 (41%)
     Frame = +3

    Query: 246 CSSCGKSMALSSARCLVCSAPITNLIREYNVRANATTDKSFSIGRFVTGLPPFSKKKSAE 425
               C +CGK + L  A+C  C     N     N+ A    D    +G  +  +P   KK   E
    Sbjct: 5   CPNCGKEVNLGEAKCPFCGYDFVN-----NINAKIPADLGM-MGIRLNNVPKKKKKAEPE 58

    Query: 426 NKWSLHKEGLQGRQIPENMREKYNRKPWILEDETG 530
               NK  + K   Q   + +    K+ +K  +++ + G
    Sbjct: 59  NK-RVEKNTTQKVAVTKAKELKHAKKNKVVKKKKG 92

    >dbj|BAB27816.1| (AK011747) Zinc finger, C3HC4 type (RING finger) containing
               protein~data source:Pfam, source key:PF00097,
               evidence:ISS~putative [Mus musculus]
              Length = 494

     Score = 33.5 bits (75), Expect = 1.6
     Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
     Frame = +3

    Query: 207 SDLYGT---SCKHTTLCSSCGKSMALSSARCLVCSAPITNL--IREYNVRANATTDKSFS 371
               SDL  T    C+H  LC+SC  ++   +  C +C  P   L  IR    +  A +  SFS
    Sbjct: 245 SDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPISFS 304

    >ref|NP_566724.1| (NM_113229) auxin-regulated protein; protein id: At3g23280.1,
               supported by cDNA: 41648. [Arabidopsis thaliana]
              Length = 462

     Score = 33.1 bits (74), Expect = 2.1
     Identities = 16/46 (34%), Positives = 22/46 (47%)
     Frame = +3

    Query: 201 SPSDLYGTSCKHTTLCSSCGKSMALSSARCLVCSAPITNLIREYNV 338
               +PS+     C H   C SC K +   +  C VC A I  +I+ Y V
    Sbjct: 417 APSEAVCVPCGHVAGCMSCLKEIKSKNWGCPVCRAKIDQVIKLYRV 462

    >gb|AAM65682.1| (AY088137) unknown [Arabidopsis thaliana]
              Length = 462

     Score = 33.1 bits (74), Expect = 2.1
     Identities = 16/46 (34%), Positives = 22/46 (47%)
     Frame = +3

    Query: 201 SPSDLYGTSCKHTTLCSSCGKSMALSSARCLVCSAPITNLIREYNV 338
               +PS+     C H   C SC K +   +  C VC A I  +I+ Y V
    Sbjct: 417 APSEAVCVPCGHVAGCMSCLKEIKSKNWGCPVCRAKIDQVIKLYRV 462

    >dbj|BAA95741.1| (AB025608) contains similarity to ankyrin like
               protein~gene_id:K14B15.19 [Arabidopsis thaliana]
              Length = 454

     Score = 33.1 bits (74), Expect = 2.1
     Identities = 16/46 (34%), Positives = 22/46 (47%)
     Frame = +3

    Query: 201 SPSDLYGTSCKHTTLCSSCGKSMALSSARCLVCSAPITNLIREYNV 338
               +PS+     C H   C SC K +   +  C VC A I  +I+ Y V
    Sbjct: 409 APSEAVCVPCGHVAGCMSCLKEIKSKNWGCPVCRAKIDQVIKLYRV 454

    >ref|NP_199323.1| (NM_123878) putative protein; protein id: At5g45100.1, supported by
               cDNA: gi_16604441 [Arabidopsis thaliana]
     dbj|BAB09495.1| (AB019224) gene_id:K17O22.9~pir||T04751~strong similarity to
               unknown protein [Arabidopsis thaliana]
     gb|AAL24227.1| (AY058839) AT5g45100/K17O22_9 [Arabidopsis thaliana]
              Length = 294

     Score = 33.1 bits (74), Expect = 2.1
     Identities = 17/54 (31%), Positives = 25/54 (45%), Gaps = 1/54 (1%)
     Frame = +3

    Query: 156 GSADLVLKAACEGCGS-PSDLYGTSCKHTTLCSSCGKSMALSSARCLVCSAPIT 314
               G    V+   C+ CG   + +    C+H  LC+ CG S  L +  C VC   +T
    Sbjct: 234 GDVTAVVNGGCKRCGELTASVLVLPCRHLCLCTVCGSSALLRT--CPVCDMVMT 285

    >ref|NP_683586.1| (NM_148744) auxin-regulated protein; protein id: At3g23280.2,
               supported by cDNA: gi_15010671, supported by cDNA:
               gi_16974316 [Arabidopsis thaliana]
     gb|AAK73995.1| (AY045637) AT3g23280/K14B15_17 [Arabidopsis thaliana]
     gb|AAL31143.1| (AY059650) AT3g23280/K14B15_17 [Arabidopsis thaliana]
              Length = 438

     Score = 33.1 bits (74), Expect = 2.1
     Identities = 16/46 (34%), Positives = 22/46 (47%)
     Frame = +3

    Query: 201 SPSDLYGTSCKHTTLCSSCGKSMALSSARCLVCSAPITNLIREYNV 338
               +PS+     C H   C SC K +   +  C VC A I  +I+ Y V
    Sbjct: 393 APSEAVCVPCGHVAGCMSCLKEIKSKNWGCPVCRAKIDQVIKLYRV 438

    >ref|NP_567428.1| (NM_117514) Expressed protein; protein id: At4g14365.1, supported
               by cDNA: 37809., supported by cDNA: gi_13358233,
               supported by cDNA: gi_17065423, supported by cDNA:
               gi_20148546 [Arabidopsis thaliana]
     gb|AAG40396.1|AF325044_1 (AF325044) AT4g14360 [Arabidopsis thaliana]
     gb|AAL32866.1| (AY062788) ankyrin homolog [Arabidopsis thaliana]
     gb|AAM10164.1| (AY081602) ankyrin homolog [Arabidopsis thaliana]
              Length = 376

     Score = 32.7 bits (73), Expect = 2.8
     Identities = 16/46 (34%), Positives = 22/46 (47%)
     Frame = +3

    Query: 201 SPSDLYGTSCKHTTLCSSCGKSMALSSARCLVCSAPITNLIREYNV 338
               +PS+     C H   C SC K +      C VC A I  +I+ Y+V
    Sbjct: 331 APSEAVCVPCGHVAGCISCLKEIENKKMGCPVCRANIDQVIKLYHV 376

    >emb|CAC59873.1| (AL160371) probable heat shock protein hslu [Leishmania major]
              Length = 288

     Score = 32.7 bits (73), Expect = 2.8
     Identities = 29/120 (24%), Positives = 48/120 (39%), Gaps = 2/120 (1%)
     Frame = +3

    Query: 177 KAACEGCGSPSDLYGTSCKHTTLCSSCGKSMALSSARCLVCSAPITNLIREYNVRANATT 356
               +A    C S     G +  HT L      S A ++A     +AP+TN   +  +R
    Sbjct: 3   RALSLSCRSSVAATGAASSHTLLTGVRCCSTAAAAAAAPAPAAPLTNPGSKTLIRDMRPR 62

    Query: 357 DKSFSIGRFVTGLPPFSKKKSA--ENKWSLHKEGLQGRQIPENMREKYNRKPWILEDETG 530
               +    + R++ G     K  S    N+W  H       Q+P ++RE+   K  ++   TG
    Sbjct: 63  ELMKELDRYIVGQSEAKKAVSVALRNRWRRH-------QVPSDIREEIAPKNILMIGPTG 115

    >dbj|BAB61152.1| (AP003199) contains ESTs AU068079(C11823),AU068080(C11823)~similar
               to Arabidopsis thaliana chromosome 3, F4P12.110~unknown
               protein [Oryza sativa (japonica cultivar-group)]
              Length = 313

     Score = 32.7 bits (73), Expect = 2.8
     Identities = 17/52 (32%), Positives = 24/52 (45%), Gaps = 1/52 (1%)
     Frame = +3

    Query: 186 CEGCGS-PSDLYGTSCKHTTLCSSCGKSMALSSARCLVCSAPITNLIREYNV 338
               C  C S P D     C+H  LC  C + +   + +C +C  P+  L RE  V
    Sbjct: 246 CVVCLSEPRDTAVLPCRHMCLCRECAQVLKYQTNKCPICRQPVEGL-REIEV 296

    >ref|NP_181354.1| (NM_129376) unknown protein; protein id: At2g38190.1 [Arabidopsis
               thaliana]
     pir||T01251 hypothetical protein F16M14.12 - Arabidopsis thaliana
     gb|AAC27168.1| (AC003028) unknown protein [Arabidopsis thaliana]
              Length = 124

     Score = 32.3 bits (72), Expect = 3.7
     Identities = 13/45 (28%), Positives = 20/45 (43%)
     Frame = +3

    Query: 204 PSDLYGTSCKHTTLCSSCGKSMALSSARCLVCSAPITNLIREYNV 338
               P D +   C H+  C  CG +M  +   C +C   +  + R Y V
    Sbjct: 80  PRDCFFLPCGHSVSCYECGTTMQEADGSCPICRRKMKKVKRIYTV 124

    >dbj|BAC10202.1| (AP004395) contains ESTs
               AU055804(S20063),AU055998(S20213),
               AU055803(S20063)~similar to ankyrin homolog [Oryza
               sativa (japonica cultivar-group)]
              Length = 489

     Score = 32.0 bits (71), Expect = 4.8
     Identities = 20/61 (32%), Positives = 25/61 (40%)
     Frame = +3

    Query: 156 GSADLVLKAACEGCGSPSDLYGTSCKHTTLCSSCGKSMALSSARCLVCSAPITNLIREYN 335
               G+  + L A  EG   P       C H   C SC K +      C +C A I  +IR Y
    Sbjct: 436 GTCVICLDAPVEGACIP-------CGHMAGCMSCLKDIESKKWGCPICRAKINQIIRLYA 488

    Query: 336 V 338
               V
    Sbjct: 489 V 489

    >ref|NP_610973.1| (NM_137129) CG12863 gene product [Drosophila melanogaster]
     gb|AAL48827.1| (AY071205) RE24565p [Drosophila melanogaster]
              Length = 184

     Score = 32.0 bits (71), Expect = 4.8
     Identities = 27/116 (23%), Positives = 43/116 (36%)
     Frame = +3

    Query: 186 CEGCGSPSDLYGTSCKHTTLCSSCGKSMALSSARCLVCSAPITNLIREYNVRANATTDKS 365
               C  CG    + G + KH   C +C K   +  + C  C+    +    Y  + +
    Sbjct: 69  CNRCGKCPSVNGQTYKHCESCDACVKPNYVHCSDCRRCTQKEGHNCSFYQTKQHCW--MC 126

    Query: 366 FSIGRFVTGLPPFSKKKSAENKWSLHKEGLQGRQIPENMREKYNRKPWILEDETGQ 533
                  G   T  P F K+K+   K  L       R+   + R KY R+   + + T Q
    Sbjct: 127 GQKGHIETKCPNFRKRKTNYTKGCLLCGKRNHREKRCSYRSKYFREQCFMNETTIQ 182

    >gb|AAF58228.2| (AE003814) CG12863-PA [Drosophila melanogaster]
              Length = 425

     Score = 32.0 bits (71), Expect = 4.8
     Identities = 27/116 (23%), Positives = 43/116 (36%)
     Frame = +3

    Query: 186 CEGCGSPSDLYGTSCKHTTLCSSCGKSMALSSARCLVCSAPITNLIREYNVRANATTDKS 365
               C  CG    + G + KH   C +C K   +  + C  C+    +    Y  + +
    Sbjct: 310 CNRCGKCPSVNGQTYKHCESCDACVKPNYVHCSDCRRCTQKEGHNCSFYQTKQHCW--MC 367

    Query: 366 FSIGRFVTGLPPFSKKKSAENKWSLHKEGLQGRQIPENMREKYNRKPWILEDETGQ 533
                  G   T  P F K+K+   K  L       R+   + R KY R+   + + T Q
    Sbjct: 368 GQKGHIETKCPNFRKRKTNYTKGCLLCGKRNHREKRCSYRSKYFREQCFMNETTIQ 423

    >gb|AAK84420.1|AF400063_1 (AF400063) neuralized 1 [Mus musculus]
              Length = 574

     Score = 31.6 bits (70), Expect = 6.2
     Identities = 14/37 (37%), Positives = 21/37 (55%), Gaps = 1/37 (2%)
     Frame = +3

    Query: 225 SCKHTTLCSSCGKSMALS-SARCLVCSAPITNLIREY 332
               +C H  LC SCG  +  +  A C +C  PI ++I+ Y
    Sbjct: 535 TCGHMCLCYSCGLRLKKALHACCPICRRPIKDIIKTY 571

    >ref|NP_067335.1| (NM_021360) neuralized homolog (Drosophila) [Mus musculus]
     emb|CAB65238.1| (Y15160) neuralized-like protein [Mus musculus]
              Length = 574

     Score = 31.6 bits (70), Expect = 6.2
     Identities = 14/37 (37%), Positives = 21/37 (55%), Gaps = 1/37 (2%)
     Frame = +3

    Query: 225 SCKHTTLCSSCGKSMALS-SARCLVCSAPITNLIREY 332
               +C H  LC SCG  +  +  A C +C  PI ++I+ Y
    Sbjct: 535 TCGHMCLCYSCGLRLKKALHACCPICRRPIKDIIKTY 571

    >ref|NP_181076.1| (NM_129085) unknown protein; protein id: At2g35330.1 [Arabidopsis
               thaliana]
     gb|AAC36187.1| (AC005314) unknown protein [Arabidopsis thaliana]
              Length = 711

     Score = 31.6 bits (70), Expect = 6.2
     Identities = 14/36 (38%), Positives = 18/36 (49%), Gaps = 1/36 (2%)
     Frame = +3

    Query: 228 CKHTTLCSSCGKS-MALSSARCLVCSAPITNLIREY 332
               C H  +C+SC  S M    A C  C AP+   IR +
    Sbjct: 672 CAHQVVCASCSDSFMGSGKATCPCCRAPVQQRIRVF 707

    >ref|NP_487802.1| (NC_003272) oligopeptide binding protein of ABC transporter [Nostoc
               sp. PCC 7120]
     dbj|BAB75461.1| (AP003594) oligopeptide binding protein of ABC transporter [Nostoc
               sp. PCC 7120]
              Length = 588

     Score = 31.6 bits (70), Expect = 6.2
     Identities = 18/58 (31%), Positives = 29/58 (49%), Gaps = 3/58 (5%)
     Frame = +3

    Query: 333 NVRANATTDKSFSIGRFVTGLPPFSKK---KSAENKWSLHKEGLQGRQIPENMREKYN 497
               N    ATT  ++ + + V  +  ++ K   +S    WSL   GL G  IP ++ EK+N
    Sbjct: 143 NPAVGATTSANYEVVKSVEAIDDYTVKVNFQSPNPAWSLPFVGLNGMIIPRHIFEKFN 200

    >ref|NP_203261.1| (NC_003083) IAP-4 [Epiphyas postvittana nucleopolyhedrovirus]
     gb|AAD19699.1| (AF119228) apoptosis inhibitor iap-4 [Epiphyas postvittana
               nucleopolyhedrovirus]
     gb|AAK85656.1| (AY043265) IAP-4 [Epiphyas postvittana nucleopolyhedrovirus]
              Length = 141

     Score = 31.6 bits (70), Expect = 6.2
     Identities = 14/36 (38%), Positives = 21/36 (57%)
     Frame = +3

    Query: 228 CKHTTLCSSCGKSMALSSARCLVCSAPITNLIREYN 335
               C H TLC+ C  S+ +    CL+C  P+T  + +YN
    Sbjct: 106 CGHYTLCTVC--SVQMCGKPCLLCQMPVTEYV-DYN 138

    >gb|AAM97032.1| (AY136366) unknown protein [Arabidopsis thaliana]
              Length = 738

     Score = 31.6 bits (70), Expect = 6.2
     Identities = 14/36 (38%), Positives = 18/36 (49%), Gaps = 1/36 (2%)
     Frame = +3

    Query: 228 CKHTTLCSSCGKS-MALSSARCLVCSAPITNLIREY 332
               C H  +C+SC  S M    A C  C AP+   IR +
    Sbjct: 699 CAHQVVCASCSDSFMGSGKATCPCCRAPVQQRIRVF 734

    >ref|XP_123433.1| (XM_123433) similar to neuralized homolog (Drosophila) [Mus
               musculus]
              Length = 499

     Score = 31.6 bits (70), Expect = 6.2
     Identities = 14/37 (37%), Positives = 21/37 (55%), Gaps = 1/37 (2%)
     Frame = +3

    Query: 225 SCKHTTLCSSCGKSMALS-SARCLVCSAPITNLIREY 332
               +C H  LC SCG  +  +  A C +C  PI ++I+ Y
    Sbjct: 460 TCGHMCLCYSCGLRLKKALHACCPICRRPIKDIIKTY 496

    >gb|AAK97495.1|AF401228_1 (AF401228) neuralized [Mus musculus]
              Length = 557

     Score = 31.6 bits (70), Expect = 6.2
     Identities = 14/37 (37%), Positives = 21/37 (55%), Gaps = 1/37 (2%)
     Frame = +3

    Query: 225 SCKHTTLCSSCGKSMALS-SARCLVCSAPITNLIREY 332
               +C H  LC SCG  +  +  A C +C  PI ++I+ Y
    Sbjct: 518 TCGHMCLCYSCGLRLKKALHACCPICRRPIKDIIKTY 554

    >ref|XP_085974.1| (XM_085974) similar to zinc finger protein [Homo sapiens]
              Length = 241

     Score = 31.6 bits (70), Expect = 6.2
     Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 11/50 (22%)
     Frame = +3

    Query: 186 CEGCGSPSDLYGTSCKHTTL--------CSSCGKSMALSS---ARCLVCS 302
               C  CG   +   T C+H  +        CS CGKS + SS     C +C+
    Sbjct: 187 CHACGKAFNTSSTLCQHNRIHTGEKPFQCSQCGKSFSCSSHLTRHCRMCN 236

      Database: All non-redundant GenBank CDS
      translations+PDB+SwissProt+PIR+PRF
        Posted date:  Sep 19, 2002  1:01 AM
      Number of letters in database: 370,891,306
      Number of sequences in database:  1,171,253

    Lambda     K      H
       0.318    0.135    0.401

    Gapped
    Lambda     K      H
       0.267   0.0410    0.140

    Matrix: BLOSUM62
    Gap Penalties: Existence: 11, Extension: 1
    Number of Hits to DB: 342,546,019
    Number of Sequences: 1171253
    Number of extensions: 6751909
    Number of successful extensions: 24973
    Number of sequences better than 10.0: 122
    Number of HSP's better than 10.0 without gapping: 23403
    Number of HSP's successfully gapped in prelim test: 0
    Number of HSP's that attempted gapping in prelim test: 0
    Number of HSP's gapped (non-prelim): 24941
    length of database: 370,891,306
    effective HSP length: 115
    effective length of database: 236,197,211
    effective search space used: 17950988036
    frameshift window, decay const: 50,  0.1
    T: 12
    A: 40
    X1: 16 ( 7.3 bits)
    X2: 38 (14.6 bits)
    X3: 64 (24.7 bits)
    S1: 41 (21.7 bits)