test_saf
Testing Bio.Saf on saf1.txt


BOVINE
...................................MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGR..I
QMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSI
YNLKTR........EGNVRVSRELAGHTGYLSCCRFLD.DNQIVTSSG.DTTCALWDIETGQQTTTFTGHTGDVMSLSLA
..P....DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS..
...HD..........NIIC....................GITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHD
NRVSCLGVTDG.MAVATGSWDSFLKIWN....

HUMAN
...................................MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGR..I
QMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSI
YNLKTR........EGNVRVSRELAGHTGYLSCCRFLD.DNQIVTSSG.DTTCALWDIETGQQTTTFTGHTGDVMSLSLA
..P....DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS..
...HD..........NIIC....................GITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHD
NRVSCLGVTDDGMAVATGSWDSFLKIWN....

FILONEOFORMANS
....MQD...........................IQDKIAAARREADGLKDKLRAARDQTADTSLRAMATDTPPLPR..I
TLKARRTLKGHLAKIYALHWAADTRHIVSASQDGKLIVWDAYTTNKVHAIPLRSSWVMTAAYAPSGNLVACGGLDNVCSI
YSLRGAGPGAPGAPGGQVKVARELSAHSGYLSCCRFIN.DRQIVTSSG.DMTCMLWDIEQGTRTMEFNDHTGDVMCISLA
..P....NANLFVSGACDATAKVWDIRTGKAVQTFTGHESDINAVQFFPNGDAFATGSDDASCKLFDLRADRELNSYA..
...HD..........NILC....................GITSVAFSISGRVLFAGYDDYNCNVWDTLKGERIGVLAGHE
NRVSCMGVSGDGVALCTGSWDSLLKVWS....

MOUSE
MATDGLH...........................ENETLASLKSEAESLKGKLEEERAKLHDVELHQVAERVEALGQ..F
VMKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSV
YPLTFD......KNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASG.DGTCALWDVESGQLLQSFHGHGADVLCLDLA
..PSE..TGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYS..
...KE..........SIIF....................GASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHE
NRVSTLRVSPDGTAFCSGSWDHTLRVWA....

YEAST
MAAHQMDSITYSNNVTQQYIQPQSLQDISAVEDEIQNKIEAARQESKQLHAQINKAKHKIQDASLFQMANKVTSLTKNKI
NLKPNIVLKGHNNKISDFRWSRDSKRILSASQDGFMLIWDSASGLKQNAIPLDSQWVLSCAISPSSTLVASAGLNNNCTI
YRVSKE.......NRVAQNVASIFKGHTCYISDIEFTD.NAHILTASG.DMTCALWDIPKAKRVREYSDHLGDVLALAIP
EEPNSENSSNTFASCGSDGYTYIWDSRSPSAVQSFYVNDSDINALRFFKDGMSIVAGSDNGAINMYDLRSDCSIATFSLF
RGYEERTPTPTYMAANMEYNTAQSPQTLKSTSSSYLDNQGVVSLDFSASGRLMYSCYTDIGCVVWDVLKGEIVGKLEGHG
GRVTGVRSSPDGLAVCTGSWDSTMKIWSPGYQ

ORENI
.MTEQMT...........................VRGTLKGHSGWVTQIATTPKYPDMILSASRDKSIIMWKLTRDET.N
YGIPQRSLKGHSHFVSDVVISSDG.FALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKL
WNT...........LGVCKYTIQDEGHTEWVSCVRFSNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNTVTVS
..P....DGSLCASGGKDGQAMLWDLNEGKHLYTLDSGD.VINALCFSPNRYWLCAATG.PSIKIWDLEGKIIVDELR..
...QEVIS......TNSKAEP.................PQCTSLAWSADGQTLFAGYTDN.LIVWQVTIGTR........
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