NDB Atlas Entry for Structure PR0002

# NDB ID: PR0002

## Nucleic acid features

RNA single strand, loops, overhanging bases

## Compound name

MS2 PROTEIN CAPSID/RNA COMPLEX

## Sequence in asymmetric unit

- Chain A: U C G C C A A C A G G C G G
- Chain B: U C G C C A A C A G G C G G
- Chain C: ALA SER ASN PHE THR GLN PHE VAL LEU VAL ASP ASN GLY GLY THR GLY ASP VAL THR VAL ALA PRO SER ASN PHE ALA ASN GLY VAL ALA GLU TRP ILE SER SER ASN SER ARG SER GLN ALA TYR LYS VAL THR CYS SER VAL ARG GLN SER SER ALA GLN ASN ARG LYS TYR THR ILE LYS VAL GLU VAL PRO LYS VAL ALA THR GLN THR VAL GLY GLY VAL GLU LEU PRO VAL ALA ALA TRP ARG SER TYR LEU ASN MET GLU LEU THR ILE PRO ILE PHE ALA THR ASN SER ASP CYS GLU LEU ILE VAL LYS ALA MET GLN GLY LEU LEU LYS ASP GLY ASN PRO ILE PRO SER ALA ILE ALA ALA ASN SER GLY ILE TYR
- Chain D: ALA SER ASN PHE THR GLN PHE VAL LEU VAL ASP ASN GLY GLY THR GLY ASP VAL THR VAL ALA PRO SER ASN PHE ALA ASN GLY VAL ALA GLU TRP ILE SER SER ASN SER ARG SER GLN ALA TYR LYS VAL THR CYS SER VAL ARG GLN SER SER ALA GLN ASN ARG LYS TYR THR ILE LYS VAL GLU VAL PRO LYS VAL ALA THR GLN THR VAL GLY GLY VAL GLU LEU PRO VAL ALA ALA TRP ARG SER TYR LEU ASN MET GLU LEU THR ILE PRO ILE PHE ALA THR ASN SER ASP CYS GLU LEU ILE VAL LYS ALA MET GLN GLY LEU LEU LYS ASP GLY ASN PRO ILE PRO SER ALA ILE ALA ALA ASN SER GLY ILE TYR
- Chain E: ALA SER ASN PHE THR GLN PHE VAL LEU VAL ASP ASN GLY GLY THR GLY ASP VAL THR VAL ALA PRO SER ASN PHE ALA ASN GLY VAL ALA GLU TRP ILE SER SER ASN SER ARG SER GLN ALA TYR LYS VAL THR CYS SER VAL ARG GLN SER SER ALA GLN ASN ARG LYS TYR THR ILE LYS VAL GLU VAL PRO LYS VAL ALA THR GLN THR VAL GLY GLY VAL GLU LEU PRO VAL ALA ALA TRP ARG SER TYR LEU ASN MET GLU LEU THR ILE PRO ILE PHE ALA THR ASN SER ASP CYS GLU LEU ILE VAL LYS ALA MET GLN GLY LEU LEU LYS ASP GLY ASN PRO ILE PRO SER ALA ILE ALA ALA ASN SER GLY ILE TYR

## Citation

S. Rowsell, N.J. Stonehouse, M.A. Convery, C.J. Adams, A.D. Ellington, I. Hirao, D.S. Peabody, P.G. Stockley, S.E.V. Phillips
Crystal Structures of a Series of RNA Aptamers Complexed to the Same Protein Target
Nat. Struct. Biol., 5, pp. 970-975, 1998.

## Space group

R 3 2

## Cell constants

         A =  287.500     B =  287.500     C =  652.100 (Ångstroms)
     alpha =  90.00   beta =  90.00  gamma = 120.00  (degrees)

## Crystallization conditions

- Drop: PEG 8000, Na3PO4, NaN3
- Reservoir: Na3PO4, NaN3

## Refinement

The structure was refined using the X-PLOR 3.860 program. The R value is 20.0 for 166564 reflections in the resolution range 30.0 to 2.8 Å with Fobs > 0.0 sigma(Fobs).

## Coordinates

The coordinates for the asymmetric unit of this structure are stored in the NDB archive.

## Views of PR0002

One view of PR0002

©1995-1998 The Nucleic Acid Database Project
Rutgers, The State University of New Jersey