BLAST Search Results

    BLASTP 2.0.10 [Aug-26-1999]

    Reference:
    Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
    Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
    "Gapped BLAST and PSI-BLAST: a new generation of protein database search
    programs",  Nucleic Acids Res. 25:3389-3402.

    Query= gi|114879|sp|P29247|BCPB_STRHY PHOSPHOENOLPYRUVATE
    PHOSPHOMUTASE (PHOSPHOENOLPYRUVATE MUTASE) (PEP MUTASE).
             (313 letters)

    Database: Non-redundant SwissProt sequences
               82,258 sequences; 29,652,561 total letters

     If you have any problems or questions with the results of this search
    please refer to the BLAST FAQs

                                                                       Score     E
    Sequences producing significant alignments:                        (bits)  Value

    sp|P29247|BCPB_STRHY  PHOSPHOENOLPYRUVATE PHOSPHOMUTASE (PHO...   574  e-164
    sp|P33182|PEPM_TETPY  PHOSPHOENOLPYRUVATE PHOSPHOMUTASE PREC...   228  2e-59
    sp|P54528|YQIQ_BACSU  HYPOTHETICAL 33.1 KD PROTEIN IN MMGE-B...    89  2e-17
    sp|P11435|BCPA_STRHY  CARBOXYVINYL-CARBOXYPHOSPHONATE PHOSPH...    64  3e-10
    sp|Q56062|CPPM_SALTY  PUTATIVE CARBOXYPHOSPHONOENOLPYRUVATE ...    60  7e-09
    sp|P77541|CPPM_ECOLI  PUTATIVE CARBOXYPHOSPHONOENOLPYRUVATE ...    59  1e-08
    sp|P28240|ACEA_YEAST  ISOCITRATE LYASE (ISOCITRASE) (ISOCITR...    32  2.0
    sp|P28298|ACEA_EMENI  ISOCITRATE LYASE (ISOCITRASE) (ISOCITR...    30  5.8
    sp|P28299|ACEA_NEUCR  ISOCITRATE LYASE (ISOCITRASE) (ISOCITR...    30  7.6

     sp|P29247|BCPB_STRHY PHOSPHOENOLPYRUVATE PHOSPHOMUTASE (PHOSPHOENOLPYRUVATE MUTASE) (PEP
               MUTASE)
               Length = 313

     Score =  574 bits (1463), Expect = e-164
     Identities = 280/313 (89%), Positives = 280/313 (89%)

    Query: 1   MNATEQAANGDRGTTRSAGGRLRYLLHAPGACQLMGVHDGLSARIAVAEGFEALWASGLC 60
               MNATEQAANGDRGTTRSAGGRLRYLLHAPGACQLMGVHDGLSARIAVAEGFEALWASGLC
    Sbjct: 1   MNATEQAANGDRGTTRSAGGRLRYLLHAPGACQLMGVHDGLSARIAVAEGFEALWASGLC 60

    Query: 61  MSTARGVRDSDEASWTELLTLVGTMTDAVPGVPVLVDGDTGYGNFNTXXXXXXXXXXXXX 120
               MSTARGVRDSDEASWTELLTLVGTMTDAVPGVPVLVDGDTGYGNFNT
    Sbjct: 61  MSTARGVRDSDEASWTELLTLVGTMTDAVPGVPVLVDGDTGYGNFNTARRFAGRAERVGA 120

    Query: 121 XXVCFEDKVFPKMNSFFGDGHQLAPVAEFCGKIRACKDAQRDPDFVVVARTEALISKLPM 180
                 VCFEDKVFPKMNSFFGDGHQLAPVAEFCGKIRACKDAQRDPDFVVVARTEALISKLPM
    Sbjct: 121 AGVCFEDKVFPKMNSFFGDGHQLAPVAEFCGKIRACKDAQRDPDFVVVARTEALISKLPM 180

    Query: 181 XXXXXXXXXXXXXXXXXXFIHSRMNTPQQIATFMERWEGSTPVLIAPTTYHTPSVDDFAA 240
                                 FIHSRMNTPQQIATFMERWEGSTPVLIAPTTYHTPSVDDFAA
    Sbjct: 181 EEALDRAAAYAEAGADALFIHSRMNTPQQIATFMERWEGSTPVLIAPTTYHTPSVDDFAA 240

    Query: 241 LGIAGCIWANHSMRAAFAAMRDVCQRIRTDRGIYGIEDQVAPLKEIFGLFDYEGLEKDEN 300
               LGIAGCIWANHSMRAAFAAMRDVCQRIRTDRGIYGIEDQVAPLKEIFGLFDYEGLEKDEN
    Sbjct: 241 LGIAGCIWANHSMRAAFAAMRDVCQRIRTDRGIYGIEDQVAPLKEIFGLFDYEGLEKDEN 300

    Query: 301 CYTQAPDLAAVQG 313
               CYTQAPDLAAVQG
    Sbjct: 301 CYTQAPDLAAVQG 313

     sp|P33182|PEPM_TETPY PHOSPHOENOLPYRUVATE PHOSPHOMUTASE PRECURSOR (PHOSPHOENOLPYRUVATE
               MUTASE) (PEP MUTASE)
               Length = 300

     Score =  228 bits (574), Expect = 2e-59
     Identities = 114/283 (40%), Positives = 164/283 (57%), Gaps = 2/283 (0%)

    Query: 21  RLRYLLHAPGACQLMGVHDGLSARIAVAEGFEALWASGLCMSTARGVRDSDEASWTELLT 80
               +L+ ++ +     +M  H+GLSA I    GF+ +W SGL +S A GVRDS+EAS+T++L
    Sbjct: 18  QLKNMIQSKDLSFIMEAHNGLSAAIVEETGFKGIWGSGLSISAAMGVRDSNEASYTQVLE 77

    Query: 81  LVGTMTDAVPGVPVLVDGDTGYGNFNTXXXXXXXXXXXXXXXVCFEDKVFPKMNSFFGDG 140
               ++  M+D    +P+L+DGDTGYGN+N                VC EDK+FPK NS   DG
    Sbjct: 78  VLEFMSDRTK-IPILLDGDTGYGNYNNARRLVKKLEQRSIAGVCLEDKIFPKRNSLLDDG 136

    Query: 141 HQ-LAPVAEFCGKIRACKDAQRDPDFVVVARTEALISKLPMXXXXXXXXXXXXXXXXXXF 199
                Q LAP+ EF  KI+ACKD Q+D DF VVAR EA I+   +
    Sbjct: 137 RQELAPINEFVAKIKACKDTQQDADFQVVARVEAFIAGWGLEEALKRAEAYRNAGADAIL 196

    Query: 200 IHSRMNTPQQIATFMERWEGSTPVLIAPTTYHTPSVDDFAALGIAGCIWANHSMRAAFAA 259
               +HS++  P +I  FM+ W+  +PV+I PT YHT   D F   G+   IWANH+MRA  +A
    Sbjct: 197 MHSKLKEPSEIEAFMKEWKNRSPVIIVPTNYHTVPTDTFRKWGVNMVIWANHNMRACVSA 256

    Query: 260 MRDVCQRIRTDRGIYGIEDQVAPLKEIFGLFDYEGLEKDENCY 302
               M++  +RI  D  +  +E +VA +KE+F L   + L++ +  Y
    Sbjct: 257 MQETSRRIYEDESLVNVEPKVAKVKEVFRLQGEDELKQADKKY 299

     sp|P54528|YQIQ_BACSU HYPOTHETICAL 33.1 KD PROTEIN IN MMGE-BFMBAA INTERGENIC REGION
               Length = 301

     Score = 88.5 bits (216), Expect = 2e-17
     Identities = 79/289 (27%), Positives = 120/289 (41%), Gaps = 24/289 (8%)

    Query: 20  GRLRYLLHAPGACQLMGVHDGLSARIAVAEGFEALWASGLCMSTARGVRDSDEASWTELL 79
               GR R L+ AP   Q+ G HDG++A +A   GF A++ SG   + +RG+ D    +  E+
    Sbjct: 16  GRFRKLMSAPDILQIPGAHDGMAALLAKEAGFSAIYLSGAAYTASRGLPDLGIITSAEIA 75

    Query: 80  TLVGTMTDAVPGVPVLVDGDTGYGNFNTXXXXXXXXXXXXXXXVCFEDKVFPKMNSFFGD 139
                    +  A   +P+LVD DTG+G                   V  ED+  PK      +
    Sbjct: 76  ERAKDLVRAA-DLPLLVDIDTGFGGVLNAARTAREMLEARVAAVQMEDQQLPKKCGHL-N 133

    Query: 140 GHQLAPVAEFCGKIRACKDAQRDPDFVVVARTEALISKLPMXXXXXXXXXXXXXXXXXXF 199
               G QL P+ E   KI+A K A   P  +VVART+A   +
    Sbjct: 134 GKQLVPIKEMAQKIKAIKQAA--PSLIVVARTDARAQE--GLDAAIKRSEAYIEAGADAI 189

    Query: 200 IHSRMNTPQQIATFMERWEGSTPVLIAPTTY-HTP--SVDDFAALGIAGCIWANHSMRAA 256
                   +    +   F ER     P+L   T +  TP    D+F  +G    I+   S+RAA
    Sbjct: 190 FPEALQAENEFRQFAERI--PVPLLANMTEFGKTPYYRADEFEDMGFHMVIYPVTSLRAA 247

    Query: 257 FAAMRDVCQRI--------RTDRGIYGIEDQVAPLKEIFGLFDYEGLEK 297
                 A    C+R+            G++ ++ +   L +    +DYE L+K
    Sbjct: 248 AKA----CERMFGLMKEHGSQKEGLHDMQTR-KELYDTISYYDYEALDK 291

     sp|P11435|BCPA_STRHY CARBOXYVINYL-CARBOXYPHOSPHONATE PHOSPHORYLMUTASE
               (CARBOXYPHOSPHONOENOLPYRUVATE PHOSPHONOMUTASE) (CPEP
               PHOSPHONOMUTASE)
               Length = 295

     Score = 64.4 bits (154), Expect = 3e-10
     Identities = 47/152 (30%), Positives = 71/152 (45%), Gaps = 3/152 (1%)

    Query: 23  RYLLHAPGACQLMGVHDGLSARIAVAEGFEALWASGLCMSTAR-GVRDSDEASWTELLTL 81
               R L++AP    +   +D LSA++    GF A+  +G   S +  G+ D    S +E
    Sbjct: 10  RELMNAPEILVVPSAYDALSAKVIQQAGFPAVHMTGSGTSASMLGLPDLGFTSVSEQAIN 69

    Query: 82  VGTMTDAVPGVPVLVDGDTGYGNFNTXXXXXXXXXXXXXXXVCFEDKVFPKMNSFFGDGH 141
               +  +   V  VPV++D D GYGN  +                  ED+V PK      +G
    Sbjct: 70  LKNIVLTVD-VPVIMDADAGYGNAMSVWRATREFERVGIVGYHLEDQVNPKRCGHL-EGK 127

    Query: 142 QLAPVAEFCGKIRACKDAQRDPDFVVVARTEA 173
               +L    E  GKI A  +A+ D DF ++ART+A
    Sbjct: 128 RLISTEEMTGKIEAAVEAREDEDFTIIARTDA 159

     sp|Q56062|CPPM_SALTY PUTATIVE CARBOXYPHOSPHONOENOLPYRUVATE PHOSPHONOMUTASE (CPEP
               PHOSPHONOMUTASE)
               Length = 295

     Score = 59.7 bits (142), Expect = 7e-09
     Identities = 49/165 (29%), Positives = 80/165 (47%), Gaps = 14/165 (8%)

    Query: 17  SAGGRLRYLLHAPGACQLMGVHDGLSARIAVAEGFEALWASGLCMSTAR-GVRDSDEASW 75
               S G   R  L      Q++G  +   A +A   G++A++ SG  ++    G+ D   ++
    Sbjct: 5   SPGQAFRAALAKENPLQIVGAINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTL 64

    Query: 76  TELLTLVGTMTDAVPGVPVLVDGDTGYGN--FNTXXXXXXXXXXXXXXXVCFEDKVFPKM 133
                ++LT +  +TD  P +P+LVD D G+G+  FN                +  ED+V  K
    Sbjct: 65  DDVLTDIRRITDVCP-LPLLVDADIGFGSSAFNVARTVKSIAKAGAAA-LHIEDQVGAKR 122

    Query: 134 NSFFGDGHQ----LAPVAEFCGKIRACKDAQRDPDFVVVARTEAL 174
                     GH+    +    E   +IRA  DA+ DP+FV++ART+AL
    Sbjct: 123 C-----GHRPNKAIVSKEEMVDRIRAAVDARTDPNFVIMARTDAL 162

     sp|P77541|CPPM_ECOLI PUTATIVE CARBOXYPHOSPHONOENOLPYRUVATE PHOSPHONOMUTASE (CPEP
               PHOSPHONOMUTASE)
               Length = 296

     Score = 58.9 bits (140), Expect = 1e-08
     Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 14/165 (8%)

    Query: 17  SAGGRLRYLLHAPGACQLMGVHDGLSARIAVAEGFEALWASGLCMSTAR-GVRDSDEASW 75
               S G   R  L      Q++G  +   A +A   G++A++ SG  ++    G+ D   ++
    Sbjct: 5   SPGKAFRAALTKENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTL 64

    Query: 76  TELLTLVGTMTDAVPGVPVLVDGDTGYGN--FNTXXXXXXXXXXXXXXXVCFEDKVFPKM 133
                ++LT +  +TD V  +P+LVD D G+G+  FN                +  ED+V  K
    Sbjct: 65  DDVLTDIRRITD-VCSLPLLVDADIGFGSSAFNVARTVKSMIKAGAAG-LHIEDQVGAKR 122

    Query: 134 NSFFGDGHQ----LAPVAEFCGKIRACKDAQRDPDFVVVARTEAL 174
                     GH+    +    E   +IRA  DA+ DPDFV++ART+AL
    Sbjct: 123 C-----GHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDAL 162

     sp|P28240|ACEA_YEAST ISOCITRATE LYASE (ISOCITRASE) (ISOCITRATASE) (ICL)
               Length = 557

     Score = 31.7 bits (70), Expect = 2.0
     Identities = 21/84 (25%), Positives = 31/84 (36%), Gaps = 4/84 (4%)

    Query: 93  PVLVDGDTGYGNFNTXXXXXXXXXXXXXXXVCFEDKVFPKMNSFFGDGHQLAPVAEFCGK 152
               P++ D D G+G                   +  ED+           G  + PV E   +
    Sbjct: 175 PIVADADAGHGGLTAVFKLTKMFIERGAAGIHMEDQTSTNKKCGHMAGRCVIPVQEHVNR 234

    Query: 153 ---IRACKDAQRDPDFVVVARTEA 173
                  IR C D     D +VVART++
    Sbjct: 235 LVTIRMCADIMHS-DLIVVARTDS 257

     sp|P28298|ACEA_EMENI ISOCITRATE LYASE (ISOCITRASE) (ISOCITRATASE) (ICL)
               Length = 536

     Score = 30.1 bits (66), Expect = 5.8
     Identities = 20/84 (23%), Positives = 34/84 (39%), Gaps = 4/84 (4%)

    Query: 93  PVLVDGDTGYGNFNTXXXXXXXXXXXXXXXVCFEDKVFPKMNSFFGDGHQLAPVAEFCGK 152
               P++ D DTG+G                   +  ED+           G  L P++E   +
    Sbjct: 162 PIIADADTGHGGLTAVMKLTKLFVERGAAGIHIEDQAPGTKKCGHMAGKVLVPISEHINR 221

    Query: 153 IRACKDAQRD---PDFVVVARTEA 173
               + A + AQ D    D + +ART++
    Sbjct: 222 LVAIR-AQADIMGTDLLAIARTDS 244

     sp|P28299|ACEA_NEUCR ISOCITRATE LYASE (ISOCITRASE) (ISOCITRATASE) (ICL)
               Length = 547

     Score = 29.7 bits (65), Expect = 7.6
     Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 4/84 (4%)

    Query: 93  PVLVDGDTGYGNFNTXXXXXXXXXXXXXXXVCFEDKVFPKMNSFFGDGHQLAPVAEFCGK 152
               P++ D DTG+G                   +  ED+           G  L P+ E   +
    Sbjct: 173 PIVADADTGHGGLTAVMKLTKLFIEKGAAGIHIEDQAPGTKKCGHMAGKVLVPIQEHINR 232

    Query: 153 IRACKDAQRD---PDFVVVARTEA 173
               + A + AQ D    D + +ART+A
    Sbjct: 233 LVAIR-AQADIMGSDLLCIARTDA 255

      Database: Non-redundant SwissProt sequences
        Posted date:  Dec 28, 1999  4:33 PM
      Number of letters in database: 29,652,561
      Number of sequences in database:  82,258

    Lambda     K      H
       0.322    0.137    0.422

    Gapped
    Lambda     K      H
       0.270   0.0470    0.230

    Matrix: BLOSUM62
    Gap Penalties: Existence: 11, Extension: 1
    Number of Hits to DB: 17065937
    Number of Sequences: 82258
    Number of extensions: 635594
    Number of successful extensions: 1159
    Number of sequences better than 10.0: 9
    Number of HSP's better than 10.0 without gapping: 6
    Number of HSP's successfully gapped in prelim test: 3
    Number of HSP's that attempted gapping in prelim test: 1143
    Number of HSP's gapped (non-prelim): 10
    length of query: 313
    length of database: 29,652,561
    effective HSP length: 48
    effective length of query: 265
    effective length of database: 25,704,177
    effective search space: 6811606905
    effective search space used: 6811606905
    T: 11
    A: 40
    X1: 16 ( 7.4 bits)
    X2: 38 (14.8 bits)
    X3: 64 (24.9 bits)
    S1: 41 (21.9 bits)
    S2: 65 (29.7 bits)