METATOOL OUTPUT Version 3.5 (28.03.2001) C:\METATOOL\META35~1.EXE

INPUT FILE: EXAMPLE10.TXT

INTERNAL METABOLITES: 5
REACTIONS: 2

  2 external L-Glutamate
  2 external NAD+
  2 external NADH
  1 int      L-glutamine
  1 int      oxoglutarate
  1 int      H2O
  1 int      2-oxoglutarate
  1 int      NH3
  8 metabolites,  11 is the summarized frequency

edges	frequency of nodes
  0	  0
  1	  5
  2	  3

STOICHIOMETRIC MATRIX
 
 matrix dimension r5 x c2
 0  1 
 0  2 
-1  0 
 1  0 
 1  0 
The following line indicates reversible (0) and irreversible reactions (1)
 0  1 
rows and columns are sorted as declared in the inputfile

NOT BALANCED INTERNAL METABOLITES
L-glutamine	oxoglutarate	H2O	2-oxoglutarate	NH3	

KERNEL
 
 matrix dimension r0 x c2
2 reactions (columns) are sorted in the same order as in the ENZREV ENZIRREV section.

 enzymes
 - not found -


 overall reaction
 - not found -


The remaining overall reactions perform no net transformation of external metabolites.

SUBSETS OF REACTIONS
 
 matrix dimension r0 x c2
2 reactions (columns) are sorted in the same order as in the ENZREV ENZIRREV section.

 enzymes
 - not found -


 overall reaction
 - not found -


The remaining overall reactions perform no net transformation of external metabolites.

REDUCED SYSTEM with 5 branch point metabolites in 2 reactions (columns)
 
 matrix dimension r0 x c2
The following line indicates reversible (0) and irreversible reactions (1)
 0  0 

-> Branch metabolites are : 
met                 	cons	built	reactions

-> No branch metabolites are : 
met                 	cons	built	reactions
L-glutamine         	0	1	1	i
oxoglutarate        	0	1	1	i
H2O                 	1	0	1	r
2-oxoglutarate      	0	1	1	r
NH3                 	0	1	1	r

CONVEX BASIS
 
 matrix dimension r0 x c2

 enzymes
 - not found -


 overall reaction
 - not found -


The remaining overall reactions perform no net transformation of external metabolites.

CONSERVATION RELATIONS
 
 matrix dimension r3 x c5
-2  1  0  0  0 
 0  0  1  1  0 
 0  0  1  0  1 
 1 :	L-glutamine + oxoglutarate = const
 2 :	H2O + 2-oxoglutarate = const
 3 :	H2O + NH3 = const

ELEMENTARY MODES
 
 matrix dimension r0 x c2
2 reactions (columns) are sorted in the same order as in the ENZREV ENZIRREV section.

 enzymes
 - not found -


 overall reaction
 - not found -


The remaining overall reactions perform no net transformation of external metabolites.

The elementary modes ARE EQUAL to convex basis.
